Jeremy Wang

University of North Carolina at Chapel Hill
Department of Computer Science




Education

B.S. 2008 - Computer Information Systems, Computing and Information Technology, Psychology
Guilford College, Greensboro, NC

M.S. 2010 - Computer Science
The University of North Carolina at Chapel Hill, NC

Research Assistant

Computational Genetics [Website]
Advisor: Leonard McMillan [Website]

Courses Taken

BIOL 621 - Principles of Genetic Analysis
COMP 665 - Images, Graphics, and Vision
COMP 715 - Visualization in the Sciences
COMP 723 - Software Design and Implementation
COMP 735 - Distributed and Concurrent Algorithms
COMP 740 - Computer Architecture and Implementation
COMP 790 - Bioinformatics Algorithms
COMP 915 - Technical Communication in Computer Science
COMP 916 - Professional Practice in Computer Science

Publications [Google Scholar]

MT Ferris, D Aylor, AC Whitmore, R Buus, E Chesler, LE Gralinski, B Haagmans, L McMillan, D Miller, W Valdar, J Wang, G Churchill, D Threadgill, F Pardo-Manuel de Villena, R Baric, MT Heise. New insights into influenza pathogenesis using the Collaborative Cross. CTC 2010.

Jeremy Wang, Kyle J Moore, Qi Zhang, Fernando Pardo-Manuel de Villena, Wei Wang, Leonard McMillan. Genome-wide compatible SNP intervals and their properties. ACM Bioinformatics and Computational Biology 2010.

Jeremy Wang, Fernando Pardo-Manuel de Villena, Leonard McMillan. Dynamic Visualization and Comparative Analysis of Multiple Collinear Genomic Data. ACM Bioinformatics and Computational Biology 2011.

Aylor DL, Valdar W, Foulds-Mathes W, Buus RJ, Verdugo RA, Baric RS, Ferris MT, Frelinger JA, Heise M, Frieman MB, Gralinski LE, Bell TA, Didion JD, Hua K, Nehrenberg DL, Powell CL, Steigerwalt J, Xie Y, Kelada SN, Collins FS, Yang IV, Schwartz DA, Branstetter LA, Chesler EJ, Miller DR, Spence J, Liu EY, McMillan L, Sarkar A, Wang J, Wang W, Zhang Q, Broman KW, Korstanje R, Durrant C, Mott R, Iraqi FA, Pomp D, Threadgill D, Pardo-Manuel de Villena F, Churchill GA. Genetic analysis of complex traits in the emerging collaborative cross. Genome Research 2011.

Hyuna Yang, Jeremy R Wang, John P Didion, Ryan J Buus, Timothy A Bell, Catherine E Welsh, Francois Bonhomme, Alex Hon-Tsen Yu, Michael W Nachman, Jaroslav Pialek, Priscilla Tucker, Pierre Boursot, Leonard McMillan, Gary A Churchill, Fernando Pardo-Manuel de Villena. Subspecific origin and haplotype diversity in the laboratory mouse. 2011. Nature genetics 43 (7), 648-655.
Mouse Phylogeny Viewer

Jeremy R Wang, Fernando Pardo-Manuel de Villena, Heather A Lawson, James M Cheverud, Gary A Churchill, Leonard McMillan. Imputation of SNPs in inbred mice using local phylogeny. Genetics, February 2012 190:449-458; doi:10.1534/genetics.111.132381.

Collaborative Cross Consortium. The Genome Architecture of the Collaborative Cross Mouse Genetic Reference Population. Genetics, February 2012 190:389-401; doi:10.1534/genetics.111.132639.

Wei Sun, Seunggeun Lee, Vasyl Zhabotynsky, Fei Zou, Fred Wright, Jim Crowley, Zaining Yun, Ryan Buus, Darla Miller, Jeremy Wang, Leonard McMillan, Fernando Pardo-Manuel de Villena, Patrick F Sullivan. Transcriptome Atlases Of Mouse Brain Reveals Differential Expression Across Brain Regions And Genetic Backgrounds. G3 February 2012 2(2):203-211; doi: 10.1534/g3.111.001602.

Jeremy Wang, Fernando Pardo-Manuel de Villena, Leonard McMillan. Comparative analysis and visualization of multiple collinear genomes. BMC Bioinformatics, in press.
Mouse Phylogeny Viewer and Collaborative Cross Viewer