RNA Tertiary Motif Mining

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rRNAs (cutoff distance: 8Å):
Bin size: 3Å
Bin size: 4Å
Bin size: 5Å

tRNAs (cutoff distance: 8Å):
Bin size: 3Å
Bin size: 4Å
Bin size: 5Å

File format

The RNABC uses the following format:
Each subgraph starts with: >subgraph[subgraph_index]size [number_of_nodes].
Occurrence of each motif: [pdb_index] [nucleotide_indices] [base_names]
The correspondences of pdb_index and pdb name are: tRNA and rRNA.

Source code