****************************************************************

  lasoptimize:

  Optimizes LiDAR stored in binary LAS or LAZ format (1.0 - 1.4)
  for better compression and spatial coherency. Especially useful
  prior to distributing LiDAR via data portals to lower bandwidth
  and storage but also accelerate subsequent exploitation.

  In the default setting the tool will do the following:

  (1) remove fluff in coordinate resolution (i.e. when all X, Y,
      or Z coordinates are multiples of 10, 100, or 1000).
  (2) remove any additional padding in the LAS header or before
      the point block
  (3) set nicely rounded offsets in the LAS header
  (4) zero the contents of the user data field
  (5) turn (sufficiently small) EVLRs into VLRs (LAS 1.4 only)
  (6) rearrange points for better compression and spatial indexing

  The GUI allows turning off options (1) through (5).

  For multi-beam systems (RIEGL Q-1560, Leica ALS80, Optech Pegasus)
  that produce returns with (near-)identical GPS times with laser
  beams that point into different directions, it is important to 
  tell lasoptimize how the beam ID that is called 'scanner channel'
  in the new LAS 1.4 point types is coded. When older point types
  are used or when the 'scanner channel' is mapped into the flight
  line numbering or stored in the user data field it's wise to tell
  lasoptimize that either '-scanner_channel_in_point_source_ID' or
  that '-scanner_channel_in_user_data' as compression will suffer
  biggly when beam switches are ignored.

  While this tool is free it is currently only available in form
  of a compiled Windows binary. For updates check these websites
  and/or join the LAStools mailing list.

  http://laszip.org/
  http://lastools.org/
  http://groups.google.com/group/lastools/
  http://twitter.com/lastools/
  http://facebook.com/lastools/
  http://linkedin.com/groups?gid=4408378

  Martin @rapidlasso

****************************************************************

example usage:

>> lasoptimize -i final\*.las -odir optimized

optimizes all LAS files in the 'final' folder to the 'optimized'
folder while over-writing any existing file.

>> lasoptimize -i final\*.laz -scanner_channel_in_point_source_ID -odir optimized

optimizes all LAZ files in the 'final' folder to the 'optimized'
folder while over-writing any existing file. The files are from
a multi-beam system and the scanner channel is encoded into the
flightline number that is stored in the 'pount source ID' field
of each point.

other available options are

-do_not_zero_user_data
-do_not_move_EVLRs
-do_not_remove_padding
-do_not_set_nice_offset
-do_not_eliminate_fluff
-scanner_channel_in_point_source_ID
-scanner_channel_in_user_data

for more info:

E:\LAStools\bin>lasoptimize -h
Filter points based on their coordinates.
  -keep_tile 631000 4834000 1000 (ll_x ll_y size)
  -keep_circle 630250.00 4834750.00 100 (x y radius)
  -keep_xy 630000 4834000 631000 4836000 (min_x min_y max_x max_y)
  -drop_xy 630000 4834000 631000 4836000 (min_x min_y max_x max_y)
  -keep_x 631500.50 631501.00 (min_x max_x)
  -drop_x 631500.50 631501.00 (min_x max_x)
  -drop_x_below 630000.50 (min_x)
  -drop_x_above 630500.50 (max_x)
  -keep_y 4834500.25 4834550.25 (min_y max_y)
  -drop_y 4834500.25 4834550.25 (min_y max_y)
  -drop_y_below 4834500.25 (min_y)
  -drop_y_above 4836000.75 (max_y)
  -keep_z 11.125 130.725 (min_z max_z)
  -drop_z 11.125 130.725 (min_z max_z)
  -drop_z_below 11.125 (min_z)
  -drop_z_above 130.725 (max_z)
  -keep_xyz 620000 4830000 100 621000 4831000 200 (min_x min_y min_z max_x max_y max_z)
  -drop_xyz 620000 4830000 100 621000 4831000 200 (min_x min_y min_z max_x max_y max_z)
Filter points based on their return numbering.
  -keep_first -first_only -drop_first
  -keep_last -last_only -drop_last
  -keep_second_last -drop_second_last
  -keep_first_of_many -keep_last_of_many
  -drop_first_of_many -drop_last_of_many
  -keep_middle -drop_middle
  -keep_return 1 2 3
  -drop_return 3 4
  -keep_single -drop_single
  -keep_double -drop_double
  -keep_triple -drop_triple
  -keep_quadruple -drop_quadruple
  -keep_number_of_returns 5
  -drop_number_of_returns 0
Filter points based on the scanline flags.
  -drop_scan_direction 0
  -keep_scan_direction_change
  -keep_edge_of_flight_line
Filter points based on their intensity.
  -keep_intensity 20 380
  -drop_intensity_below 20
  -drop_intensity_above 380
  -drop_intensity_between 4000 5000
Filter points based on classifications or flags.
  -keep_class 1 3 7
  -drop_class 4 2
  -keep_extended_class 43
  -drop_extended_class 129 135
  -drop_synthetic -keep_synthetic
  -drop_keypoint -keep_keypoint
  -drop_withheld -keep_withheld
  -drop_overlap -keep_overlap
Filter points based on their user data.
  -keep_user_data 1
  -drop_user_data 255
  -keep_user_data_below 50
  -keep_user_data_above 150
  -keep_user_data_between 10 20
  -drop_user_data_below 1
  -drop_user_data_above 100
  -drop_user_data_between 10 40
Filter points based on their point source ID.
  -keep_point_source 3
  -keep_point_source_between 2 6
  -drop_point_source 27
  -drop_point_source_below 6
  -drop_point_source_above 15
  -drop_point_source_between 17 21
Filter points based on their scan angle.
  -keep_scan_angle -15 15
  -drop_abs_scan_angle_above 15
  -drop_abs_scan_angle_below 1
  -drop_scan_angle_below -15
  -drop_scan_angle_above 15
  -drop_scan_angle_between -25 -23
Filter points based on their gps time.
  -keep_gps_time 11.125 130.725
  -drop_gps_time_below 11.125
  -drop_gps_time_above 130.725
  -drop_gps_time_between 22.0 48.0
Filter points based on their RGB/CIR/NIR channels.
  -keep_RGB_red 1 1
  -keep_RGB_green 30 100
  -keep_RGB_blue 0 0
  -keep_RGB_nir 64 127
  -keep_NDVI 0.2 0.7 -keep_NDVI_from_CIR -0.1 0.5
  -keep_NDVI_intensity_is_NIR 0.4 0.8 -keep_NDVI_green_is_NIR -0.2 0.2
Filter points based on their wavepacket.
  -keep_wavepacket 0
  -drop_wavepacket 3
Filter points based on extra attributes.
  -keep_attribute_above 0 5.0
  -drop_attribute_below 1 1.5
Filter points with simple thinning.
  -keep_every_nth 2 -drop_every_nth 3
  -keep_random_fraction 0.1
  -thin_with_grid 1.0
  -thin_pulses_with_time 0.0001
  -thin_points_with_time 0.000001
Boolean combination of filters.
  -filter_and
Transform coordinates.
  -translate_x -2.5
  -scale_z 0.3048
  -rotate_xy 15.0 620000 4100000 (angle + origin)
  -translate_xyz 0.5 0.5 0
  -translate_then_scale_y -0.5 1.001
  -switch_x_y -switch_x_z -switch_y_z
  -clamp_z_below 70.5
  -clamp_z 70.5 72.5
  -copy_attribute_into_z 0
  -copy_intensity_into_z
Transform raw xyz integers.
  -translate_raw_z 20
  -translate_raw_xyz 1 1 0
  -translate_raw_xy_at_random 2 2
  -clamp_raw_z 500 800
Transform intensity.
  -set_intensity 0
  -scale_intensity 2.5
  -translate_intensity 50
  -translate_then_scale_intensity 0.5 3.1
  -clamp_intensity 0 255
  -clamp_intensity_above 255
  -copy_NIR_into_intensity
Transform scan_angle.
  -scale_scan_angle 1.944445
  -translate_scan_angle -5
  -translate_then_scale_scan_angle -0.5 2.1
Change the return number or return count of points.
  -repair_zero_returns
  -set_return_number 1
  -set_extended_return_number 10
  -change_return_number_from_to 2 1
  -set_number_of_returns 2
  -set_number_of_returns 15
  -change_number_of_returns_from_to 0 2
Modify the classification.
  -set_classification 2
  -set_extended_classification 0
  -change_classification_from_to 2 4
  -classify_z_below_as -5.0 7
  -classify_z_above_as 70.0 7
  -classify_z_between_as 2.0 5.0 4
  -classify_intensity_above_as 200 9
  -classify_intensity_below_as 30 11
  -classify_intensity_between_as 500 900 15
  -change_extended_classification_from_to 6 46
  -move_ancient_to_extended_classification
Change the flags.
  -set_withheld_flag 0
  -set_synthetic_flag 1
  -set_keypoint_flag 0
  -set_overlap_flag 1
Modify the extended scanner channel.
  -set_scanner_channel 2
  -copy_user_data_into_scanner_channel
Modify the user data.
  -set_user_data 0
  -scale_user_data 1.5
  -change_user_data_from_to 23 26
  -change_user_data_from_to 23 26
  -copy_attribute_into_user_data 1
Modify the point source ID.
  -set_point_source 500
  -change_point_source_from_to 1023 1024
  -copy_user_data_into_point_source
  -copy_scanner_channel_into_point_source
  -merge_scanner_channel_into_point_source
  -split_scanner_channel_from_point_source
  -bin_Z_into_point_source 200
  -bin_abs_scan_angle_into_point_source 2
Transform gps_time.
  -set_gps_time 113556962.005715
  -translate_gps_time 40.50
  -adjusted_to_week
  -week_to_adjusted 1671
Transform RGB/NIR colors.
  -set_RGB 255 0 127
  -set_RGB_of_class 9 0 0 255
  -scale_RGB 2 4 2
  -scale_RGB_down (by 256)
  -scale_RGB_up (by 256)
  -switch_R_G -switch_R_B -switch_B_G
  -copy_RGB_into_intensity
  -copy_R_into_NIR -copy_R_into_intensity
  -copy_G_into_NIR -copy_G_into_intensity
  -copy_B_into_NIR -copy_B_into_intensity
Supported LAS Inputs
  -i lidar.las
  -i lidar.laz
  -i lidar1.las lidar2.las lidar3.las -merged
  -i *.las - merged
  -i flight0??.laz flight1??.laz
  -i terrasolid.bin
  -i esri.shp
  -i nasa.qi
  -i lidar.txt -iparse xyzti -iskip 2 (on-the-fly from ASCII)
  -i lidar.txt -iparse xyzi -itranslate_intensity 1024
  -lof file_list.txt
  -stdin (pipe from stdin)
  -rescale 0.01 0.01 0.001
  -rescale_xy 0.01 0.01
  -rescale_z 0.01
  -reoffset 600000 4000000 0
Fast AOI Queries for LAS/LAZ with spatial indexing LAX files
  -inside min_x min_y max_x max_y
  -inside_tile ll_x ll_y size
  -inside_circle center_x center_y radius
Supported LAS Outputs
  -o lidar.las
  -o lidar.laz
  -o xyzta.txt -oparse xyzta (on-the-fly to ASCII)
  -o terrasolid.bin
  -o nasa.qi
  -odir C:\data\ground (specify output directory)
  -odix _classified (specify file name appendix)
  -ocut 2 (cut the last two characters from name)
  -olas -olaz -otxt -obin -oqfit (specify format)
  -stdout (pipe to stdout)
  -nil    (pipe to NULL)
LAStools (by martin@rapidlasso.com) version 170805
usage:
lasoptimize -i lidar.las -o lidar.laz
lasoptimize -h

---------------

if you find bugs let me (martin.isenburg@rapidlasso.com) know.